Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm34272-201ENSMUST00000208886 253 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 AC113198.1-201ENSMUST00000226353 832 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Col18a1P39061 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Gm37725-201ENSMUST00000193965 2125 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Col18a1P39061 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Xpo7-206ENSMUST00000228346 4491 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Gm20486-201ENSMUST00000101544 128 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Col18a1P39061 Mir669l-201ENSMUST00000103771 98 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Klra13-ps-201ENSMUST00000125813 802 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm23894-201ENSMUST00000158107 313 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28943-201ENSMUST00000186187 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28736-201ENSMUST00000186257 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Gm29401-201ENSMUST00000186690 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm29178-204ENSMUST00000186784 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28589-201ENSMUST00000186991 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28936-201ENSMUST00000187153 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm29121-201ENSMUST00000187611 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28243-201ENSMUST00000187801 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28844-202ENSMUST00000187977 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm29058-201ENSMUST00000189510 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm10925-201ENSMUST00000189941 678 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm29624-201ENSMUST00000190018 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28780-201ENSMUST00000190223 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28969-211ENSMUST00000190992 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm28990-207ENSMUST00000191219 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm36468-201ENSMUST00000192119 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm31572-201ENSMUST00000193341 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm30175-201ENSMUST00000194173 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm30858-201ENSMUST00000195516 615 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Igkv12-66-201ENSMUST00000199305 348 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC8.86□□□□□ -0.99
Col18a1P39061 AC156037.1-201ENSMUST00000221133 127 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 AC125543.3-201ENSMUST00000221991 126 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm43176-201ENSMUST00000199653 2989 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm11885-201ENSMUST00000118473 1428 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm15016-201ENSMUST00000117300 720 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm15233-201ENSMUST00000118747 400 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC8.85□□□□□ -0.99
Col18a1P39061 Mir3095-201ENSMUST00000175552 87 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm5947-201ENSMUST00000179156 714 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm5645-201ENSMUST00000179597 714 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm27006-201ENSMUST00000182218 943 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm27409-201ENSMUST00000184727 80 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Col18a1P39061 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm45473-201ENSMUST00000211452 616 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Gm46436-201ENSMUST00000221851 1294 ntBASIC8.85□□□□□ -0.99
Col18a1P39061 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col18a1P39061 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col18a1P39061 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col18a1P39061 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms