Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43850-201ENSMUST00000202021 578 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm44213-201ENSMUST00000204977 703 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col2a1P28481 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Col2a1P28481 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Col2a1P28481 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.58□□□□□ -1.2
Col2a1P28481 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col2a1P28481 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col2a1P28481 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm13137-201ENSMUST00000118035 345 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm22548-201ENSMUST00000174899 78 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm28527-201ENSMUST00000185210 297 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm7492-201ENSMUST00000201745 725 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm19212-201ENSMUST00000216642 862 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.58□□□□□ -1.2
Col2a1P28481 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.58□□□□□ -1.2
Col2a1P28481 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 A1cf-203ENSMUST00000224400 1204 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col2a1P28481 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.58□□□□□ -1.2
Col2a1P28481 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.58□□□□□ -1.2
Col2a1P28481 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col2a1P28481 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Gm4660-201ENSMUST00000131499 403 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Gm26381-201ENSMUST00000174895 92 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Gm29385-201ENSMUST00000186831 363 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.57□□□□□ -1.2
Col2a1P28481 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Col2a1P28481 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.57□□□□□ -1.2
Col2a1P28481 Gm5708-201ENSMUST00000196289 886 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Gm43354-201ENSMUST00000196862 346 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Gm18805-201ENSMUST00000206872 655 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Col2a1P28481 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Col2a1P28481 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col2a1P28481 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
Col2a1P28481 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.57□□□□□ -1.2
Col2a1P28481 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col2a1P28481 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms