Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm20136-201ENSMUST00000207501 891 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm45405-201ENSMUST00000211544 609 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Gm6667-201ENSMUST00000217169 564 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 AC164424.3-201ENSMUST00000220809 148 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 AC166358.8-201ENSMUST00000223288 105 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 AC124739.1-201ENSMUST00000223433 148 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 AC138604.2-201ENSMUST00000226620 921 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdx1P18111 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdx1P18111 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Cdx1P18111 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdx1P18111 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdx1P18111 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdx1P18111 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdx1P18111 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
Cdx1P18111 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Cdx1P18111 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Cdx1P18111 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm25614-201ENSMUST00000104013 133 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm25631-201ENSMUST00000104390 130 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm13739-201ENSMUST00000118020 530 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm11865-201ENSMUST00000118093 859 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm15078-201ENSMUST00000118371 782 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm12804-201ENSMUST00000121030 999 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC5.53□□□□□ -1.52
Cdx1P18111 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC5.53□□□□□ -1.52
Cdx1P18111 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC5.53□□□□□ -1.52
Cdx1P18111 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Mir1983-201ENSMUST00000157523 132 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm5283-201ENSMUST00000177874 334 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm28164-201ENSMUST00000190143 442 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm37724-201ENSMUST00000195240 1221 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm21048-201ENSMUST00000202470 1166 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm44539-201ENSMUST00000206010 238 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm18559-201ENSMUST00000208249 604 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm7394-201ENSMUST00000209138 1032 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.53□□□□□ -1.52
Cdx1P18111 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 AC134869.2-201ENSMUST00000225788 421 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cdx1P18111 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Cdx1P18111 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cdx1P18111 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm24405-201ENSMUST00000083033 167 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Gm9585-201ENSMUST00000219681 1404 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdx1P18111 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.53□□□□□ -1.52
Cdx1P18111 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC5.52□□□□□ -1.53
Cdx1P18111 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx1P18111 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms