Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.44□□□□□ -1.22
Scn3aA2ASI5 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.44□□□□□ -1.22
Scn3aA2ASI5 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
Scn3aA2ASI5 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scn3aA2ASI5 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Scn3aA2ASI5 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Scn3aA2ASI5 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm13222-201ENSMUST00000119638 138 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm22820-201ENSMUST00000157205 329 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm24435-201ENSMUST00000157886 110 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm23632-201ENSMUST00000175289 125 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm9274-201ENSMUST00000182505 984 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm7492-201ENSMUST00000201745 725 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm46364-201ENSMUST00000218548 319 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm9321-201ENSMUST00000221179 778 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Scn3aA2ASI5 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm25244-201ENSMUST00000178089 132 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Mir7046-201ENSMUST00000183435 66 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm28996-201ENSMUST00000190316 721 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm38237-201ENSMUST00000193366 376 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm18290-201ENSMUST00000202900 844 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm13455-201ENSMUST00000118767 517 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm9005-201ENSMUST00000119908 607 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm20620-201ENSMUST00000177528 168 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm27005-201ENSMUST00000182783 921 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm4083-201ENSMUST00000207158 451 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.42□□□□□ -1.22
Scn3aA2ASI5 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.42□□□□□ -1.22
Scn3aA2ASI5 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms