Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm18040-201ENSMUST00000217922 827 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm15158-201ENSMUST00000120577 570 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm11370-201ENSMUST00000120583 260 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm15096-201ENSMUST00000121918 878 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm25556-201ENSMUST00000158077 144 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm9672-201ENSMUST00000166437 425 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm24756-201ENSMUST00000177002 96 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm26607-201ENSMUST00000180661 867 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm29156-201ENSMUST00000187764 499 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm18352-201ENSMUST00000189113 902 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm44565-201ENSMUST00000208194 269 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm22053-201ENSMUST00000083394 200 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Cdc40Q9DC48 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm23485-201ENSMUST00000104181 155 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm15310-201ENSMUST00000117891 372 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 BC064078-201ENSMUST00000122939 570 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms