Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm25311-201ENSMUST00000104136 132 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm25379-201ENSMUST00000104338 114 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm23834-201ENSMUST00000104436 129 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm13900-201ENSMUST00000119402 498 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm6451-201ENSMUST00000121488 717 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm7244-201ENSMUST00000164658 455 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm22690-201ENSMUST00000175054 110 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm45319-201ENSMUST00000210220 318 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.95□□□□□ -1.3
Cdk5rap3Q99LM2 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm25724-201ENSMUST00000104531 117 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm14729-201ENSMUST00000118373 689 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm13988-201ENSMUST00000119363 288 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm11498-201ENSMUST00000120660 949 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm11263-201ENSMUST00000121853 749 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm14613-201ENSMUST00000122239 752 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm26025-201ENSMUST00000158655 271 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm26179-201ENSMUST00000177723 132 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm4605-201ENSMUST00000203148 625 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Thap6-201ENSMUST00000191860 3151 ntBASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cdk5rap3Q99LM2 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.93□□□□□ -1.3
Cdk5rap3Q99LM2 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms