Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm4914-201ENSMUST00000119757 459 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm11834-201ENSMUST00000122257 585 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm14380-201ENSMUST00000122298 431 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm16113-201ENSMUST00000159629 372 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm21894-201ENSMUST00000179631 546 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Mir8105-201ENSMUST00000184718 89 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm19480-201ENSMUST00000185547 667 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm43839-201ENSMUST00000196183 2325 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm35212-201ENSMUST00000196672 606 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm8168-201ENSMUST00000209631 948 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm17850-201ENSMUST00000210023 1154 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Cblb-205ENSMUST00000227756 3378 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.99□□□□□ -1.13
Clp1Q99LI9 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Clp1Q99LI9 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 AC132336.1-201ENSMUST00000222844 1740 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm5182-201ENSMUST00000217708 6092 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm14885-201ENSMUST00000117969 496 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm13501-201ENSMUST00000118477 979 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm13900-201ENSMUST00000119402 498 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Llph-ps1-201ENSMUST00000121281 390 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm14710-201ENSMUST00000146082 1066 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm24050-201ENSMUST00000158623 290 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm38061-201ENSMUST00000192490 365 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm44221-201ENSMUST00000203552 388 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm31532-201ENSMUST00000203555 767 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm44192-201ENSMUST00000204195 556 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 CT030030.1-201ENSMUST00000218809 152 ntBASIC7.98□□□□□ -1.13
Clp1Q99LI9 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.98□□□□□ -1.13
Clp1Q99LI9 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms