Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm5446-201ENSMUST00000091762 784 ntBASIC7.06□□□□□ -1.28
Usp11Q99K46 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp11Q99K46 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp11Q99K46 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp11Q99K46 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp11Q99K46 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp11Q99K46 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Usp11Q99K46 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp11Q99K46 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp11Q99K46 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.06□□□□□ -1.28
Usp11Q99K46 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp11Q99K46 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm24519-201ENSMUST00000104507 132 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm11858-201ENSMUST00000117935 838 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm14466-201ENSMUST00000119028 451 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm15842-201ENSMUST00000120513 618 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm22728-201ENSMUST00000158087 129 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm23617-201ENSMUST00000175410 95 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm8192-201ENSMUST00000182196 958 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm37973-201ENSMUST00000195767 1289 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm6681-201ENSMUST00000205215 607 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm46231-201ENSMUST00000220152 314 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.05□□□□□ -1.28
Usp11Q99K46 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp11Q99K46 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp11Q99K46 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp11Q99K46 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp11Q99K46 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm24869-201ENSMUST00000104072 128 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm12106-201ENSMUST00000116006 1200 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm11833-201ENSMUST00000118393 853 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.04□□□□□ -1.28
Usp11Q99K46 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29048-201ENSMUST00000185342 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29403-201ENSMUST00000185491 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28234-201ENSMUST00000185657 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28248-201ENSMUST00000186093 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29633-202ENSMUST00000186217 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28829-201ENSMUST00000186231 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28261-201ENSMUST00000186417 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28815-201ENSMUST00000186751 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28608-201ENSMUST00000186860 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28122-201ENSMUST00000187088 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28420-201ENSMUST00000187340 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28106-201ENSMUST00000187640 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28698-201ENSMUST00000187734 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29224-201ENSMUST00000187965 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29189-201ENSMUST00000188018 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29476-201ENSMUST00000188397 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29505-201ENSMUST00000188424 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm28125-201ENSMUST00000188470 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29391-201ENSMUST00000188545 615 ntBASIC7.04□□□□□ -1.28
Usp11Q99K46 Gm29280-201ENSMUST00000188571 615 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms