Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm13578-201ENSMUST00000120849 590 ntBASIC7.74□□□□□ -1.17
Syne4Q8CII8 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm20615-201ENSMUST00000177503 705 ntBASIC7.74□□□□□ -1.17
Syne4Q8CII8 Mir6971-201ENSMUST00000183497 63 ntBASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm28413-201ENSMUST00000189369 291 ntBASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm37490-201ENSMUST00000195566 724 ntBASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm43555-201ENSMUST00000196588 310 ntBASIC7.74□□□□□ -1.17
Syne4Q8CII8 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.74□□□□□ -1.17
Syne4Q8CII8 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne4Q8CII8 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm6446-201ENSMUST00000120604 818 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm23225-201ENSMUST00000158121 114 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm17711-201ENSMUST00000172028 237 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm20432-201ENSMUST00000173716 250 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm43037-201ENSMUST00000196808 250 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm17950-201ENSMUST00000214617 646 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm24695-201ENSMUST00000083877 83 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.73□□□□□ -1.17
Syne4Q8CII8 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne4Q8CII8 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm45177-201ENSMUST00000209104 2307 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm3076-201ENSMUST00000161613 451 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm25246-201ENSMUST00000175476 69 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms