Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm29663-201ENSMUST00000186962 853 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm17790-201ENSMUST00000191545 1228 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm42580-201ENSMUST00000197223 753 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm30517-201ENSMUST00000197350 772 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm2860-201ENSMUST00000199226 707 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm46231-201ENSMUST00000220152 314 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm9315-201ENSMUST00000222696 908 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm25498-201ENSMUST00000104424 129 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm16073-201ENSMUST00000116032 517 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm12439-201ENSMUST00000117162 365 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm8722-201ENSMUST00000121466 769 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm12175-201ENSMUST00000122081 345 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm16284-201ENSMUST00000140995 400 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm17212-201ENSMUST00000166666 259 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm6047-201ENSMUST00000167221 574 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29048-201ENSMUST00000185342 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29403-201ENSMUST00000185491 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28234-201ENSMUST00000185657 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28248-201ENSMUST00000186093 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29633-202ENSMUST00000186217 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28829-201ENSMUST00000186231 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28261-201ENSMUST00000186417 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28815-201ENSMUST00000186751 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28608-201ENSMUST00000186860 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28122-201ENSMUST00000187088 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28420-201ENSMUST00000187340 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28106-201ENSMUST00000187640 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28698-201ENSMUST00000187734 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29224-201ENSMUST00000187965 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29189-201ENSMUST00000188018 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29476-201ENSMUST00000188397 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29505-201ENSMUST00000188424 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28125-201ENSMUST00000188470 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29391-201ENSMUST00000188545 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29280-201ENSMUST00000188571 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28349-201ENSMUST00000188590 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29652-201ENSMUST00000188622 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28819-206ENSMUST00000188816 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29079-201ENSMUST00000188875 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28213-201ENSMUST00000189183 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29382-201ENSMUST00000189549 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29377-205ENSMUST00000189603 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28327-201ENSMUST00000189638 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28790-201ENSMUST00000189642 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28907-201ENSMUST00000189700 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29586-207ENSMUST00000189745 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29115-201ENSMUST00000189870 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28366-201ENSMUST00000190147 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29212-201ENSMUST00000190384 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29533-201ENSMUST00000190403 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28162-201ENSMUST00000190545 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29030-201ENSMUST00000190848 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28742-201ENSMUST00000191001 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28899-201ENSMUST00000191161 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29567-201ENSMUST00000191188 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28222-201ENSMUST00000191210 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28776-201ENSMUST00000191282 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29306-201ENSMUST00000191366 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29618-201ENSMUST00000191423 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28136-210ENSMUST00000191432 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm29251-201ENSMUST00000191480 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28658-201ENSMUST00000191532 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm32180-201ENSMUST00000192415 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm30598-201ENSMUST00000192620 615 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms