Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm22256-201ENSMUST00000102291 107 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm11972-201ENSMUST00000118514 389 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm9506-201ENSMUST00000118516 320 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm11318-201ENSMUST00000118640 961 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm13735-201ENSMUST00000120217 670 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm23673-201ENSMUST00000157474 298 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm25556-201ENSMUST00000158077 144 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm27152-201ENSMUST00000183828 99 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm37871-201ENSMUST00000194973 688 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm37720-201ENSMUST00000195497 1241 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm43546-201ENSMUST00000196721 943 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm42713-201ENSMUST00000202709 945 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm45136-201ENSMUST00000205793 943 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm10297-201ENSMUST00000207136 651 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim9Q8C7M3 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Snord88a-201ENSMUST00000116723 90 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm15616-201ENSMUST00000118662 375 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm12535-201ENSMUST00000121025 484 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm11882-201ENSMUST00000121463 506 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm25395-201ENSMUST00000157343 272 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm20432-201ENSMUST00000173716 250 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm26587-201ENSMUST00000180795 989 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm27866-201ENSMUST00000184459 171 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm36965-201ENSMUST00000193797 394 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm8190-201ENSMUST00000199603 586 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm24405-201ENSMUST00000083033 167 ntBASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim9Q8C7M3 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms