Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Mir688-201ENSMUST00000102055 75 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm25276-201ENSMUST00000104300 124 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm13282-201ENSMUST00000121577 545 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm12094-201ENSMUST00000121781 472 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm15187-201ENSMUST00000122329 264 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm24893-201ENSMUST00000122745 369 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm25962-201ENSMUST00000157173 168 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm7502-201ENSMUST00000169235 733 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm24923-201ENSMUST00000178201 88 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm2058-201ENSMUST00000178791 560 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm7426-201ENSMUST00000179046 404 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm28006-201ENSMUST00000183841 122 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Mir6409-201ENSMUST00000184957 92 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm28894-201ENSMUST00000185214 615 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm8480-201ENSMUST00000190350 698 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm29011-201ENSMUST00000191059 712 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm37369-201ENSMUST00000194179 615 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm42938-201ENSMUST00000198414 1072 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm42983-201ENSMUST00000199879 815 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm43108-201ENSMUST00000200525 293 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm44380-201ENSMUST00000203125 293 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm18562-201ENSMUST00000209949 915 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 AC154461.4-201ENSMUST00000224878 468 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 AC165154.2-201ENSMUST00000227310 336 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm5321-201ENSMUST00000072050 447 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm23238-201ENSMUST00000083007 164 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm43168-201ENSMUST00000201039 1612 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tsen54Q8C2A2 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm14893-201ENSMUST00000117904 282 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm14631-201ENSMUST00000119067 594 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm27617-201ENSMUST00000184321 168 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm28413-201ENSMUST00000189369 291 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Gm37225-201ENSMUST00000193423 325 ntBASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tsen54Q8C2A2 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms