Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm8534-201ENSMUST00000118553 766 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm9556-201ENSMUST00000182938 940 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm27152-201ENSMUST00000183828 99 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm21728-201ENSMUST00000188442 695 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm21889-201ENSMUST00000188487 695 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20932-201ENSMUST00000189115 694 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm28665-201ENSMUST00000189269 670 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm21920-201ENSMUST00000190042 695 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm43377-201ENSMUST00000201640 455 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm18040-201ENSMUST00000217922 827 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Mir674-201ENSMUST00000102421 100 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm14158-201ENSMUST00000118409 308 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm15149-201ENSMUST00000119370 360 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm7113-201ENSMUST00000120477 958 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm15349-201ENSMUST00000121154 204 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm22990-201ENSMUST00000175427 89 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm8609-201ENSMUST00000182967 998 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm37620-201ENSMUST00000192910 501 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm44896-201ENSMUST00000206190 772 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm18559-201ENSMUST00000208249 604 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm18781-201ENSMUST00000211252 924 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 Gm17849-201ENSMUST00000219788 853 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.17□□□□□ -1.26
Upf3bQ3ULL6 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms