Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm9321-201ENSMUST00000221179 778 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Col18a1P39061 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Gm37730-201ENSMUST00000192432 2211 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Col18a1P39061 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 AC115746.1-201ENSMUST00000228949 3617 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.88□□□□□ -0.99
Col18a1P39061 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC8.88□□□□□ -0.99
Col18a1P39061 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 AC138284.5-201ENSMUST00000214389 652 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC8.88□□□□□ -0.99
Col18a1P39061 AC122327.2-201ENSMUST00000220883 120 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 AC122327.3-201ENSMUST00000221852 120 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 AC166341.1-201ENSMUST00000223360 105 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Mir7-2-201ENSMUST00000083675 97 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Col18a1P39061 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm42440-201ENSMUST00000197906 2284 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC8.88□□□□□ -0.99
Col18a1P39061 AC125328.1-201ENSMUST00000226812 2265 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.88□□□□□ -0.99
Col18a1P39061 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Col18a1P39061 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col18a1P39061 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Gm36401-201ENSMUST00000194255 2028 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.87□□□□□ -0.99
Col18a1P39061 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.87□□□□□ -0.99
Col18a1P39061 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Trav3n-2-201ENSMUST00000197693 334 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Trav3d-2-201ENSMUST00000199874 334 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Gm10297-201ENSMUST00000207136 651 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Gm45739-201ENSMUST00000213094 388 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Gm18026-201ENSMUST00000222789 727 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Gm38284-201ENSMUST00000194803 4539 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 AC151904.4-201ENSMUST00000219868 1319 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col18a1P39061 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Col18a1P39061 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Col18a1P39061 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.87□□□□□ -0.99
Col18a1P39061 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Mir193b-201ENSMUST00000103784 79 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm15568-201ENSMUST00000118589 1213 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm13245-201ENSMUST00000119646 260 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col18a1P39061 Gm12754-201ENSMUST00000121908 454 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm16269-201ENSMUST00000160532 409 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm9529-201ENSMUST00000177598 579 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm2325-201ENSMUST00000186637 581 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gm6137-201ENSMUST00000187552 578 ntBASIC8.86□□□□□ -0.99
Col18a1P39061 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC8.86□□□□□ -0.99
Col18a1P39061 Gm38840-201ENSMUST00000204716 843 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms