Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm43637-201ENSMUST00000202206 2926 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm15048-201ENSMUST00000118201 954 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm14938-201ENSMUST00000119482 943 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.87□□□□□ -1.15
Col1a1P11087 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col1a1P11087 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Mir6361-201ENSMUST00000185079 101 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm44982-201ENSMUST00000208795 471 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm26130-201ENSMUST00000083171 138 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.86□□□□□ -1.15
Col1a1P11087 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col1a1P11087 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Col1a1P11087 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Col1a1P11087 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Gm23884-201ENSMUST00000122687 294 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.86□□□□□ -1.15
Col1a1P11087 Gm22210-201ENSMUST00000158101 144 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.86□□□□□ -1.15
Col1a1P11087 Gm20778-201ENSMUST00000178524 627 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.86□□□□□ -1.15
Col1a1P11087 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 AC154616.2-201ENSMUST00000227978 398 ntBASIC7.86□□□□□ -1.15
Col1a1P11087 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col1a1P11087 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col1a1P11087 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col1a1P11087 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Col1a1P11087 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Col1a1P11087 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC7.85□□□□□ -1.15
Col1a1P11087 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col1a1P11087 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Gm13265-201ENSMUST00000118090 421 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Gm11198-201ENSMUST00000119771 974 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Gm15959-201ENSMUST00000121724 368 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Gm5401-201ENSMUST00000122444 365 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Gm26037-201ENSMUST00000158150 311 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Gm27853-201ENSMUST00000184176 250 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Gm37430-201ENSMUST00000193039 196 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Gm44239-201ENSMUST00000204228 271 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Col1a1P11087 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col1a1P11087 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Col1a1P11087 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
Col1a1P11087 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.85□□□□□ -1.15
Col1a1P11087 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Col1a1P11087 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Col1a1P11087 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm12565-201ENSMUST00000119004 649 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Gm13489-201ENSMUST00000121234 971 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm24179-201ENSMUST00000158925 127 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms