Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.36
Pcdh1F7BJK1 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.59□□□□□ -1.36
Pcdh1F7BJK1 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Pcdh1F7BJK1 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Pcdh1F7BJK1 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.59□□□□□ -1.36
Pcdh1F7BJK1 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Pcdh1F7BJK1 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm7785-201ENSMUST00000117121 892 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm12988-201ENSMUST00000119054 478 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm12262-201ENSMUST00000119915 305 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm25178-201ENSMUST00000122633 325 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm10086-201ENSMUST00000136334 354 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm23229-201ENSMUST00000157297 105 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm26408-201ENSMUST00000157672 127 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm22690-201ENSMUST00000175054 110 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm21577-201ENSMUST00000190823 697 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm17970-201ENSMUST00000192199 685 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm37463-201ENSMUST00000193819 796 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm8023-201ENSMUST00000195298 903 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm43582-201ENSMUST00000196149 343 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm20948-201ENSMUST00000211091 449 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm45712-201ENSMUST00000212417 335 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm4898-201ENSMUST00000218519 832 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Pcdh1F7BJK1 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms