Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm4992-201ENSMUST00000120256 768 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm11553-201ENSMUST00000120682 240 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm29470-201ENSMUST00000188007 696 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm37328-201ENSMUST00000193191 640 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm8920-201ENSMUST00000196153 924 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm43212-201ENSMUST00000198208 394 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm44374-201ENSMUST00000199821 140 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm9367-201ENSMUST00000205703 546 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Mir425-201ENSMUST00000083645 85 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm24473-201ENSMUST00000104483 131 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm22342-201ENSMUST00000122647 298 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm20454-201ENSMUST00000172713 221 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm25574-201ENSMUST00000175245 249 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Mir5617-201ENSMUST00000176786 57 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm21877-201ENSMUST00000185640 694 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm21301-201ENSMUST00000189476 699 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm37191-201ENSMUST00000193346 388 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.79□□□□□ -1.32
Srp54bE9PXC0 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Srp54bE9PXC0 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm11445-201ENSMUST00000119101 532 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm8312-201ENSMUST00000119380 618 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm15596-201ENSMUST00000121139 784 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm9167-201ENSMUST00000182469 962 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm21392-201ENSMUST00000182950 972 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms