Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5654-201ENSMUST00000217787 475 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm24924-201ENSMUST00000084007 164 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Rtel1-204ENSMUST00000108814 4322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm13531-201ENSMUST00000121893 543 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm15237-201ENSMUST00000122104 469 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm14970-201ENSMUST00000122289 355 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm19898-201ENSMUST00000177490 251 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm24628-201ENSMUST00000122761 289 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm17223-201ENSMUST00000171413 481 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm6931-201ENSMUST00000183103 371 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm18914-201ENSMUST00000214625 616 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm15621-201ENSMUST00000119162 364 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm23233-201ENSMUST00000157301 137 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm16269-201ENSMUST00000160532 409 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Mir6362-201ENSMUST00000184329 107 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm2059-201ENSMUST00000212025 287 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm25227-201ENSMUST00000158204 112 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm45596-201ENSMUST00000209279 434 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.43□□□□□ -1.38
Col6a3E9PWQ3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms