Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm27507-201ENSMUST00000184199 93 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm29240-201ENSMUST00000187248 286 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm3511-201ENSMUST00000199823 204 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm9357-201ENSMUST00000207138 805 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 AC154323.2-201ENSMUST00000226557 1151 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 AC121542.2-201ENSMUST00000227529 400 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm22194-201ENSMUST00000116869 95 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm12573-201ENSMUST00000118158 286 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm12740-201ENSMUST00000118794 308 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm14251-201ENSMUST00000122133 279 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm4613-201ENSMUST00000165488 276 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm19840-201ENSMUST00000169624 882 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm23164-201ENSMUST00000175084 111 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm22990-201ENSMUST00000175427 89 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Mir5617-201ENSMUST00000176786 57 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm34424-201ENSMUST00000213400 782 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm23456-201ENSMUST00000083335 137 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm13991-201ENSMUST00000120190 648 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm28527-201ENSMUST00000185210 297 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm37689-201ENSMUST00000193139 275 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm44221-201ENSMUST00000203552 388 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 A1cf-203ENSMUST00000224400 1204 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Gm24924-201ENSMUST00000084007 164 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Mir484-201ENSMUST00000093566 67 ntBASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Usf3B2RUQ2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm43181-201ENSMUST00000197001 2072 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm4806-201ENSMUST00000222704 1690 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms