Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
Upk3aQ9JKX8 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm15621-201ENSMUST00000119162 364 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm4997-201ENSMUST00000154056 360 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Mir7669-201ENSMUST00000183442 58 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm27186-201ENSMUST00000184223 307 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm27295-201ENSMUST00000184264 153 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm19480-201ENSMUST00000185547 667 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm29156-201ENSMUST00000187764 499 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm37871-201ENSMUST00000194973 688 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm9367-201ENSMUST00000205703 546 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm6575-201ENSMUST00000222946 697 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upk3aQ9JKX8 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm12229-201ENSMUST00000120487 468 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm14847-201ENSMUST00000121978 519 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm11434-201ENSMUST00000122379 629 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm3585-201ENSMUST00000173438 875 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm23968-201ENSMUST00000175047 125 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm19815-201ENSMUST00000175818 335 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm27970-201ENSMUST00000184854 407 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm9504-201ENSMUST00000196322 468 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Gm17997-201ENSMUST00000211801 840 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Upk3aQ9JKX8 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms