Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Cdc40Q9DC48 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cdc40Q9DC48 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cdc40Q9DC48 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cdc40Q9DC48 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm22256-201ENSMUST00000102291 107 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm2178-201ENSMUST00000104927 357 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm12468-201ENSMUST00000116189 404 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm14729-201ENSMUST00000118373 689 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm5601-201ENSMUST00000118909 972 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm14863-201ENSMUST00000119648 307 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm8550-201ENSMUST00000161621 653 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm8192-201ENSMUST00000182196 958 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm28413-201ENSMUST00000189369 291 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm37620-201ENSMUST00000192910 501 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm44227-201ENSMUST00000203576 241 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm44856-201ENSMUST00000206639 304 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdc40Q9DC48 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm24286-201ENSMUST00000157632 128 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm23276-201ENSMUST00000157913 138 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm24545-201ENSMUST00000158651 85 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm28958-201ENSMUST00000185864 703 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm44342-201ENSMUST00000196874 129 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm44383-201ENSMUST00000198940 129 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm4860-201ENSMUST00000200368 454 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm42673-201ENSMUST00000202676 337 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdc40Q9DC48 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.32□□□□□ -1.4
Cdc40Q9DC48 Gm2975-201ENSMUST00000209710 820 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms