Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm31711-201ENSMUST00000220687 196 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm5446-201ENSMUST00000091762 784 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm6419-201ENSMUST00000097166 429 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm12174-201ENSMUST00000119853 813 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm13366-201ENSMUST00000122198 970 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm3760-201ENSMUST00000167475 804 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm22254-201ENSMUST00000179186 110 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm21839-201ENSMUST00000179536 378 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm42673-201ENSMUST00000202676 337 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm44251-201ENSMUST00000204963 442 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.65□□□□□ -1.34
Msh4Q99MT2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Gm26130-201ENSMUST00000083171 138 ntBASIC6.65□□□□□ -1.34
Msh4Q99MT2 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Msh4Q99MT2 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.65□□□□□ -1.35
Msh4Q99MT2 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Msh4Q99MT2 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.65□□□□□ -1.35
Msh4Q99MT2 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Msh4Q99MT2 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
Msh4Q99MT2 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Msh4Q99MT2 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.65□□□□□ -1.35
Msh4Q99MT2 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Msh4Q99MT2 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Msh4Q99MT2 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Msh4Q99MT2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Msh4Q99MT2 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.64□□□□□ -1.35
Msh4Q99MT2 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Msh4Q99MT2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms