Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm9005-201ENSMUST00000119908 607 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm5255-201ENSMUST00000120125 642 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm13357-201ENSMUST00000120528 537 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm6451-201ENSMUST00000121488 717 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm14380-201ENSMUST00000122298 431 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm6428-201ENSMUST00000161062 345 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm27998-201ENSMUST00000184902 361 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm9504-201ENSMUST00000196322 468 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm2040-201ENSMUST00000202979 289 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm18012-201ENSMUST00000204558 773 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm44163-201ENSMUST00000205140 475 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm44571-201ENSMUST00000208092 533 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm18469-201ENSMUST00000208850 439 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm36758-201ENSMUST00000222594 310 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm12754-201ENSMUST00000121908 454 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm12518-201ENSMUST00000122075 779 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm24343-201ENSMUST00000158708 111 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm27972-201ENSMUST00000184720 137 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm34768-201ENSMUST00000193884 565 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm44471-201ENSMUST00000197963 100 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm4083-201ENSMUST00000207158 451 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm45782-201ENSMUST00000212670 366 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm43221-201ENSMUST00000197612 2071 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scrt1Q99M85 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.01□□□□□ -1.45
Scrt1Q99M85 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.01□□□□□ -1.45
Scrt1Q99M85 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms