Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm13196-201ENSMUST00000118297 379 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm11258-201ENSMUST00000121086 1218 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm18430-201ENSMUST00000197534 682 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm42472-201ENSMUST00000201626 859 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm44565-201ENSMUST00000208194 269 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm30196-201ENSMUST00000208957 160 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm5948-201ENSMUST00000219627 839 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 AC132260.2-201ENSMUST00000224482 344 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm5341-201ENSMUST00000058881 489 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Thap6-201ENSMUST00000191860 3151 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28bQ8CEG5 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm15665-201ENSMUST00000119116 847 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm11617-201ENSMUST00000119609 639 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm13222-201ENSMUST00000119638 138 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm13338-201ENSMUST00000120235 361 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm12321-201ENSMUST00000121485 804 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm13221-201ENSMUST00000121712 430 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm23220-201ENSMUST00000158115 137 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm24738-201ENSMUST00000158856 123 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm5920-201ENSMUST00000187390 853 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28070-201ENSMUST00000191502 445 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm20900-201ENSMUST00000078729 472 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.62□□□□□ -1.35
Ccdc28bQ8CEG5 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms