Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm8924-201ENSMUST00000197405 1132 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm21040-201ENSMUST00000199493 1132 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm19175-201ENSMUST00000199895 916 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm42673-201ENSMUST00000202676 337 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm44896-201ENSMUST00000206190 772 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm18871-201ENSMUST00000218655 745 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm19047-201ENSMUST00000220922 1099 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 AC155270.1-202ENSMUST00000221503 352 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm10126-201ENSMUST00000221732 168 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm9267-201ENSMUST00000222831 404 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 AC154838.2-201ENSMUST00000226602 747 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm44723-201ENSMUST00000207369 4000 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm45001-201ENSMUST00000208279 2515 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm37310-201ENSMUST00000195237 2968 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm14893-201ENSMUST00000117904 282 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm22728-201ENSMUST00000158087 129 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm4202-201ENSMUST00000169025 733 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm28413-201ENSMUST00000189369 291 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm7019-201ENSMUST00000194122 369 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm43048-201ENSMUST00000196101 388 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm10416-201ENSMUST00000197379 645 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm44374-201ENSMUST00000199821 140 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Vps53Q8CCB4 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Gm23276-201ENSMUST00000157913 138 ntBASIC7.98□□□□□ -1.13
Vps53Q8CCB4 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.98□□□□□ -1.13
Vps53Q8CCB4 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms