Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm14038-201ENSMUST00000121500 807 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm12540-201ENSMUST00000121938 319 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm28117-201ENSMUST00000188472 371 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm7891-201ENSMUST00000190284 843 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm28620-201ENSMUST00000190463 439 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm37285-201ENSMUST00000194465 1139 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm43383-201ENSMUST00000195981 469 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 AC153937.1-201ENSMUST00000218734 412 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc60Q8C4J0 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm12842-201ENSMUST00000117298 476 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm5601-201ENSMUST00000118909 972 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm12229-201ENSMUST00000120487 468 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm3810-201ENSMUST00000122413 476 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm26023-201ENSMUST00000122722 313 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm5871-201ENSMUST00000176461 718 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm7452-201ENSMUST00000200764 788 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm7463-201ENSMUST00000201541 547 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc60Q8C4J0 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm15750-201ENSMUST00000120970 616 ntBASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm4997-201ENSMUST00000154056 360 ntBASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm16297-201ENSMUST00000161466 459 ntBASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm27295-201ENSMUST00000184264 153 ntBASIC8.47□□□□□ -1.05
Ccdc60Q8C4J0 Gm27299-201ENSMUST00000184593 103 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms