Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm18313-201ENSMUST00000221036 1784 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm37790-201ENSMUST00000193136 3346 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm43279-201ENSMUST00000202376 2512 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm24473-201ENSMUST00000104483 131 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm15311-201ENSMUST00000119682 282 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm15305-201ENSMUST00000120354 288 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm25178-201ENSMUST00000122633 325 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm25435-201ENSMUST00000158277 267 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm9167-201ENSMUST00000182469 962 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm8183-201ENSMUST00000183134 980 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm35323-201ENSMUST00000191836 499 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Gm7986-201ENSMUST00000221336 551 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 AC158954.1-201ENSMUST00000228272 1006 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Cmah-208ENSMUST00000224819 9482 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 AC174797.5-201ENSMUST00000225055 1860 ntBASIC5.92□□□□□ -1.46
Nkx3-1P97436 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nkx3-1P97436 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm29670-201ENSMUST00000190228 2491 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm36933-201ENSMUST00000194945 3071 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm12140-201ENSMUST00000121214 544 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm11341-201ENSMUST00000122316 447 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm26570-201ENSMUST00000180672 342 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm21392-201ENSMUST00000182950 972 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms