Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm4764-201ENSMUST00000130207 1233 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm26950-201ENSMUST00000182734 498 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm44456-201ENSMUST00000196554 89 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm43719-201ENSMUST00000200088 2199 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm11852-201ENSMUST00000120806 222 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC4.44□□□□□ -1.7
PrkdcP97313 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 AC153357.1-201ENSMUST00000219190 482 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm5457-201ENSMUST00000022260 333 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 AC117769.2-201ENSMUST00000224612 469 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 CT009728.1-201ENSMUST00000225228 1050 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 AC113031.6-202ENSMUST00000228468 1145 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Gm13313-201ENSMUST00000118938 1084 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Igkv4-83-201ENSMUST00000196933 334 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PrkdcP97313 AC159979.1-201ENSMUST00000227927 342 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
PrkdcP97313 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PrkdcP97313 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm42881-201ENSMUST00000198636 3344 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC4.43□□□□□ -1.7
PrkdcP97313 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PrkdcP97313 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm24888-201ENSMUST00000104387 130 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm25383-201ENSMUST00000157810 144 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Gm15838-201ENSMUST00000161575 180 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Mir6343-201ENSMUST00000183584 84 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PrkdcP97313 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC4.43□□□□□ -1.7
PrkdcP97313 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC4.43□□□□□ -1.7
PrkdcP97313 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms