Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nphp4P59240 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC9.09□□□□□ -0.95
Nphp4P59240 AC137902.1-201ENSMUST00000228184 102 ntBASIC9.09□□□□□ -0.95
Nphp4P59240 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nphp4P59240 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nphp4P59240 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nphp4P59240 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Nphp4P59240 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nphp4P59240 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Nphp4P59240 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.09□□□□□ -0.95
Nphp4P59240 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Nphp4P59240 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC9.09□□□□□ -0.95
Nphp4P59240 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Gm38178-201ENSMUST00000194502 2471 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Nphp4P59240 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC9.08□□□□□ -0.96
Nphp4P59240 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Gm21846-201ENSMUST00000179257 3073 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Gm7658-201ENSMUST00000119064 1124 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Gm23071-201ENSMUST00000158242 115 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Gm25244-201ENSMUST00000178089 132 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Mir7082-201ENSMUST00000183526 92 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC9.08□□□□□ -0.96
Nphp4P59240 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Gm5853-201ENSMUST00000197183 632 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Gm18781-201ENSMUST00000211252 924 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 AC154431.2-201ENSMUST00000225215 1055 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
Nphp4P59240 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Nphp4P59240 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Nphp4P59240 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC9.08□□□□□ -0.96
Nphp4P59240 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Gm42685-201ENSMUST00000200378 2390 ntBASIC9.08□□□□□ -0.96
Nphp4P59240 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC9.08□□□□□ -0.96
Nphp4P59240 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC9.08□□□□□ -0.96
Nphp4P59240 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Nphp4P59240 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Nphp4P59240 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Nphp4P59240 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Nphp4P59240 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm44185-201ENSMUST00000204539 3307 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 Gm22374-201ENSMUST00000104583 132 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 Gm13400-201ENSMUST00000117436 380 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm412-201ENSMUST00000193360 948 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm3321-201ENSMUST00000200603 1129 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC9.07□□□□□ -0.96
Nphp4P59240 AC154219.1-201ENSMUST00000220764 1262 ntBASIC9.07□□□□□ -0.96
Nphp4P59240 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Nphp4P59240 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Nphp4P59240 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm14550-201ENSMUST00000117918 407 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Gm15967-201ENSMUST00000120027 1116 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Mir1960-201ENSMUST00000157488 78 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Gm26381-201ENSMUST00000174895 92 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm28527-201ENSMUST00000185210 297 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms