Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm34424-201ENSMUST00000213400 782 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh11P55288 Gm17611-202ENSMUST00000220613 814 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh11P55288 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdh11P55288 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.18□□□□□ -1.42
Cdh11P55288 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh11P55288 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh11P55288 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Cdh11P55288 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh11P55288 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.18□□□□□ -1.42
Cdh11P55288 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Cdh11P55288 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Cdh11P55288 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdh11P55288 Mir678-201ENSMUST00000102114 84 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Gm22707-201ENSMUST00000103834 110 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm11972-201ENSMUST00000118514 389 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Gm13877-201ENSMUST00000120614 417 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Gm11257-201ENSMUST00000121313 315 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Gm14212-201ENSMUST00000122023 826 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Gm16248-201ENSMUST00000124238 243 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm22552-201ENSMUST00000157796 337 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Gm22533-201ENSMUST00000158821 274 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdh11P55288 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdh11P55288 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.17□□□□□ -1.42
Cdh11P55288 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdh11P55288 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.16□□□□□ -1.42
Cdh11P55288 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdh11P55288 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdh11P55288 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdh11P55288 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.16□□□□□ -1.42
Cdh11P55288 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm26528-201ENSMUST00000181965 283 ntBASIC6.16□□□□□ -1.42
Cdh11P55288 Mir6357-201ENSMUST00000184246 104 ntBASIC6.16□□□□□ -1.42
Cdh11P55288 Gm5261-201ENSMUST00000185860 713 ntBASIC6.16□□□□□ -1.42
Cdh11P55288 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdh11P55288 Gm34144-201ENSMUST00000197039 259 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms