Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm25395-201ENSMUST00000157343 272 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm16589-201ENSMUST00000159522 918 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm26991-201ENSMUST00000180950 620 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm2617-201ENSMUST00000185690 1066 ntBASIC7.68□□□□□ -1.18
Sox1P53783 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Gm37088-201ENSMUST00000193887 406 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm7299-201ENSMUST00000194441 581 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm18843-201ENSMUST00000194982 719 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm38360-201ENSMUST00000195130 454 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Sox1P53783 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm43501-201ENSMUST00000202513 107 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm44088-201ENSMUST00000204595 237 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm44665-201ENSMUST00000205381 251 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm5080-201ENSMUST00000220341 743 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.68□□□□□ -1.18
Sox1P53783 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.68□□□□□ -1.18
Sox1P53783 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Sox1P53783 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm24032-201ENSMUST00000083932 159 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm10221-201ENSMUST00000088299 309 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm2136-201ENSMUST00000193945 2577 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.68□□□□□ -1.18
Sox1P53783 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Gm3822-201ENSMUST00000201941 2935 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm43981-201ENSMUST00000203285 1467 ntBASIC7.68□□□□□ -1.18
Sox1P53783 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.68□□□□□ -1.18
Sox1P53783 AC122357.2-201ENSMUST00000220732 1525 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Gm43890-201ENSMUST00000203437 2799 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Sox1P53783 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm25498-201ENSMUST00000104424 129 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm15779-201ENSMUST00000117470 412 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm11348-201ENSMUST00000118813 318 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm14869-201ENSMUST00000119007 884 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm13466-201ENSMUST00000121515 999 ntBASIC7.67□□□□□ -1.18
Sox1P53783 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm6921-201ENSMUST00000161478 435 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm18397-201ENSMUST00000176704 587 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Mir6986-201ENSMUST00000184483 58 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm4412-201ENSMUST00000186660 433 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms