Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx3P48381 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.08□□□□□ -1.44
Rfx3P48381 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.08□□□□□ -1.44
Rfx3P48381 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Rfx3P48381 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx3P48381 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Rfx3P48381 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Gm11581-201ENSMUST00000122024 763 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.07□□□□□ -1.44
Rfx3P48381 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm25969-201ENSMUST00000157166 132 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Gm18848-201ENSMUST00000182069 792 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm43160-201ENSMUST00000196453 421 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Gm9419-201ENSMUST00000200672 567 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Gm19007-201ENSMUST00000217746 874 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Rfx3P48381 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rfx3P48381 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rfx3P48381 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.07□□□□□ -1.44
Rfx3P48381 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.07□□□□□ -1.44
Rfx3P48381 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rfx3P48381 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx3P48381 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx3P48381 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm13900-201ENSMUST00000119402 498 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm15129-201ENSMUST00000119673 279 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm13221-201ENSMUST00000121712 430 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm22604-201ENSMUST00000157604 311 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm26183-201ENSMUST00000157685 139 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rfx3P48381 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm9167-201ENSMUST00000182469 962 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm27866-201ENSMUST00000184459 171 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Mir8120-201ENSMUST00000185035 139 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm2860-201ENSMUST00000199226 707 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm43436-201ENSMUST00000199308 147 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms