Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HttP42859 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC6.85□□□□□ -1.31
HttP42859 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HttP42859 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HttP42859 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.85□□□□□ -1.31
HttP42859 Mir6362-201ENSMUST00000184329 107 ntBASIC6.85□□□□□ -1.31
HttP42859 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.85□□□□□ -1.31
HttP42859 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.85□□□□□ -1.31
HttP42859 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.85□□□□□ -1.31
HttP42859 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HttP42859 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.85□□□□□ -1.31
HttP42859 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HttP42859 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HttP42859 Gm8855-201ENSMUST00000118888 878 ntBASIC6.85□□□□□ -1.31
HttP42859 Gm13493-201ENSMUST00000120318 493 ntBASIC6.85□□□□□ -1.31
HttP42859 Gm25655-201ENSMUST00000158465 290 ntBASIC6.85□□□□□ -1.31
HttP42859 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HttP42859 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HttP42859 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.85□□□□□ -1.31
HttP42859 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HttP42859 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.85□□□□□ -1.31
HttP42859 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.85□□□□□ -1.31
HttP42859 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HttP42859 Gm24200-201ENSMUST00000082955 157 ntBASIC6.85□□□□□ -1.31
HttP42859 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC6.84□□□□□ -1.31
HttP42859 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
HttP42859 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.84□□□□□ -1.31
HttP42859 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HttP42859 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.84□□□□□ -1.31
HttP42859 Mir1963-201ENSMUST00000158594 59 ntBASIC6.84□□□□□ -1.31
HttP42859 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.84□□□□□ -1.31
HttP42859 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.84□□□□□ -1.31
HttP42859 Gm26923-201ENSMUST00000182615 996 ntBASIC6.84□□□□□ -1.31
HttP42859 Mir6943-201ENSMUST00000185186 66 ntBASIC6.84□□□□□ -1.31
HttP42859 Gm28413-201ENSMUST00000189369 291 ntBASIC6.84□□□□□ -1.31
HttP42859 Gm36935-201ENSMUST00000192526 292 ntBASIC6.84□□□□□ -1.31
HttP42859 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.84□□□□□ -1.31
HttP42859 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.84□□□□□ -1.31
HttP42859 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HttP42859 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.84□□□□□ -1.31
HttP42859 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HttP42859 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HttP42859 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HttP42859 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gm10095-201ENSMUST00000222765 483 ntBASIC6.84□□□□□ -1.31
HttP42859 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.84□□□□□ -1.31
HttP42859 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HttP42859 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.84□□□□□ -1.31
HttP42859 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HttP42859 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.84□□□□□ -1.31
HttP42859 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HttP42859 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.84□□□□□ -1.31
HttP42859 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HttP42859 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
HttP42859 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HttP42859 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.84□□□□□ -1.32
HttP42859 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HttP42859 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HttP42859 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
HttP42859 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC6.83□□□□□ -1.32
HttP42859 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm25489-201ENSMUST00000158727 141 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm15838-201ENSMUST00000161575 180 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Gm17766-201ENSMUST00000209223 442 ntBASIC6.83□□□□□ -1.32
HttP42859 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms