Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.97□□□□□ -1.13
Traf1P39428 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Traf1P39428 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Traf1P39428 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.97□□□□□ -1.13
Traf1P39428 Gm14212-201ENSMUST00000122023 826 ntBASIC7.97□□□□□ -1.13
Traf1P39428 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.97□□□□□ -1.13
Traf1P39428 Gm25395-201ENSMUST00000157343 272 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Traf1P39428 Gm21392-201ENSMUST00000182950 972 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Traf1P39428 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.97□□□□□ -1.13
Traf1P39428 Gm27972-201ENSMUST00000184720 137 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Gm8524-201ENSMUST00000186232 379 ntBASIC7.97□□□□□ -1.13
Traf1P39428 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Gm43725-201ENSMUST00000200122 369 ntBASIC7.97□□□□□ -1.13
Traf1P39428 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.97□□□□□ -1.13
Traf1P39428 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Traf1P39428 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Traf1P39428 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Traf1P39428 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Traf1P39428 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Traf1P39428 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.96□□□□□ -1.13
Traf1P39428 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Traf1P39428 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.96□□□□□ -1.13
Traf1P39428 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.96□□□□□ -1.13
Traf1P39428 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Traf1P39428 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Traf1P39428 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Traf1P39428 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Traf1P39428 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Traf1P39428 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.96□□□□□ -1.13
Traf1P39428 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.96□□□□□ -1.13
Traf1P39428 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
Traf1P39428 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Traf1P39428 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Traf1P39428 Gm15216-201ENSMUST00000118058 277 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm12242-201ENSMUST00000118824 738 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm15501-202ENSMUST00000140687 625 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm3585-201ENSMUST00000173438 875 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm23164-201ENSMUST00000175084 111 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm22990-201ENSMUST00000175427 89 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Gm5334-201ENSMUST00000187472 720 ntBASIC7.96□□□□□ -1.14
Traf1P39428 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Gm29141-201ENSMUST00000190357 882 ntBASIC7.96□□□□□ -1.14
Traf1P39428 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.96□□□□□ -1.14
Traf1P39428 Gm37620-201ENSMUST00000192910 501 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm37349-201ENSMUST00000194205 624 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm44111-201ENSMUST00000204649 399 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.96□□□□□ -1.14
Traf1P39428 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.96□□□□□ -1.14
Traf1P39428 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.96□□□□□ -1.14
Traf1P39428 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.96□□□□□ -1.14
Traf1P39428 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.96□□□□□ -1.14
Traf1P39428 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Traf1P39428 Mir484-201ENSMUST00000093566 67 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.96□□□□□ -1.14
Traf1P39428 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.96□□□□□ -1.14
Traf1P39428 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Traf1P39428 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.95□□□□□ -1.14
Traf1P39428 Gm16102-201ENSMUST00000160955 420 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms