Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC8.91□□□□□ -0.98
Col18a1P39061 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm37857-201ENSMUST00000191784 1199 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm19231-201ENSMUST00000193212 830 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm37576-201ENSMUST00000194228 372 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 AC123832.2-201ENSMUST00000215151 129 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm9110-201ENSMUST00000219035 617 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Rybp-ps-201ENSMUST00000069489 681 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col18a1P39061 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.91□□□□□ -0.98
Col18a1P39061 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC8.9□□□□□ -0.98
Col18a1P39061 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col18a1P39061 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Col18a1P39061 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col18a1P39061 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Gm13626-201ENSMUST00000119435 402 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Gm15061-201ENSMUST00000121076 1046 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Gm4789-201ENSMUST00000121708 1216 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Gm12650-201ENSMUST00000121966 258 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC8.9□□□□□ -0.98
Col18a1P39061 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC8.9□□□□□ -0.98
Col18a1P39061 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC8.9□□□□□ -0.98
Col18a1P39061 Gm43105-201ENSMUST00000202987 459 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Gm19653-201ENSMUST00000204326 1039 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 AC110381.1-201ENSMUST00000218987 586 ntBASIC8.9□□□□□ -0.98
Col18a1P39061 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Col18a1P39061 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC8.9□□□□□ -0.98
Col18a1P39061 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Col18a1P39061 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Col18a1P39061 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col18a1P39061 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col18a1P39061 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Col18a1P39061 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col18a1P39061 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Col18a1P39061 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col18a1P39061 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col18a1P39061 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.89□□□□□ -0.99
Col18a1P39061 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Col18a1P39061 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm3943-201ENSMUST00000118606 718 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm11481-201ENSMUST00000120069 255 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm8317-201ENSMUST00000121261 471 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm23891-201ENSMUST00000158114 138 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm22690-201ENSMUST00000175054 110 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm44111-201ENSMUST00000204649 399 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 AC153968.2-201ENSMUST00000215579 1140 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 AC121986.1-201ENSMUST00000218588 781 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 AC161884.2-201ENSMUST00000224513 227 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 AC140368.1-202ENSMUST00000226131 658 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 CT030238.4-203ENSMUST00000227343 836 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col18a1P39061 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col18a1P39061 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm15011-201ENSMUST00000117724 1480 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col18a1P39061 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm7713-201ENSMUST00000181201 1007 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm43084-201ENSMUST00000200696 947 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm19060-201ENSMUST00000201959 421 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.89□□□□□ -0.99
Col18a1P39061 Gm45525-201ENSMUST00000210800 389 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm5119-201ENSMUST00000215858 634 ntBASIC8.89□□□□□ -0.99
Col18a1P39061 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms