Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm11517-201ENSMUST00000119491 387 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm13877-201ENSMUST00000120614 417 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm14038-201ENSMUST00000121500 807 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm26023-201ENSMUST00000122722 313 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm24157-201ENSMUST00000175265 111 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm6489-201ENSMUST00000178167 696 ntBASIC5.84□□□□□ -1.47
Upk2P38575 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm28443-201ENSMUST00000189081 698 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm18849-201ENSMUST00000189861 560 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm29160-201ENSMUST00000190094 699 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.84□□□□□ -1.47
Upk2P38575 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm4042-201ENSMUST00000216946 637 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Upk2P38575 Gm5341-201ENSMUST00000058881 489 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Gm28392-201ENSMUST00000077630 393 ntBASIC5.84□□□□□ -1.47
Upk2P38575 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upk2P38575 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upk2P38575 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upk2P38575 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upk2P38575 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Upk2P38575 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upk2P38575 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upk2P38575 Gm20706-201ENSMUST00000175985 2023 ntBASIC5.84□□□□□ -1.48
Upk2P38575 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.84□□□□□ -1.48
Upk2P38575 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Upk2P38575 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Upk2P38575 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.83□□□□□ -1.48
Upk2P38575 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upk2P38575 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.83□□□□□ -1.48
Upk2P38575 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.83□□□□□ -1.48
Upk2P38575 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Upk2P38575 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm22256-201ENSMUST00000102291 107 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm11501-201ENSMUST00000118039 581 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm7599-201ENSMUST00000121453 796 ntBASIC5.83□□□□□ -1.48
Upk2P38575 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC5.83□□□□□ -1.48
Upk2P38575 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC5.83□□□□□ -1.48
Upk2P38575 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.83□□□□□ -1.48
Upk2P38575 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.83□□□□□ -1.48
Upk2P38575 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC5.83□□□□□ -1.48
Upk2P38575 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Gm4997-201ENSMUST00000154056 360 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm25556-201ENSMUST00000158077 144 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm5456-201ENSMUST00000170706 844 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm26381-201ENSMUST00000174895 92 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm17045-201ENSMUST00000178600 844 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm26587-201ENSMUST00000180795 989 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Mir7033-201ENSMUST00000184259 81 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm28929-201ENSMUST00000185330 1193 ntBASIC5.83□□□□□ -1.48
Upk2P38575 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC5.83□□□□□ -1.48
Upk2P38575 Gm38170-201ENSMUST00000195404 816 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm43546-201ENSMUST00000196721 943 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm42713-201ENSMUST00000202709 945 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm44411-201ENSMUST00000204172 349 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm45136-201ENSMUST00000205793 943 ntBASIC5.83□□□□□ -1.48
Upk2P38575 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.83□□□□□ -1.48
Upk2P38575 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.83□□□□□ -1.48
Upk2P38575 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC5.83□□□□□ -1.48
Upk2P38575 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Upk2P38575 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Upk2P38575 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Gm24411-201ENSMUST00000083428 131 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Upk2P38575 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.83□□□□□ -1.48
Upk2P38575 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Gm43279-201ENSMUST00000202376 2512 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk2P38575 Gm43750-201ENSMUST00000199027 2493 ntBASIC5.83□□□□□ -1.48
Upk2P38575 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms