Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm45191-201ENSMUST00000205846 5439 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm26067-201ENSMUST00000103789 110 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm11533-201ENSMUST00000120287 477 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.88□□□□□ -1.15
Col1a1P11087 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm24733-201ENSMUST00000158863 253 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm23343-201ENSMUST00000158964 143 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Col1a1P11087 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm27507-201ENSMUST00000184199 93 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm27972-201ENSMUST00000184720 137 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm21524-201ENSMUST00000190499 696 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Gm21715-201ENSMUST00000191056 694 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.88□□□□□ -1.15
Col1a1P11087 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.88□□□□□ -1.15
Col1a1P11087 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.88□□□□□ -1.15
Col1a1P11087 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col1a1P11087 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Zfp850-201ENSMUST00000099111 941 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.88□□□□□ -1.15
Col1a1P11087 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.88□□□□□ -1.15
Col1a1P11087 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col1a1P11087 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col1a1P11087 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm25795-201ENSMUST00000104421 132 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm16511-201ENSMUST00000120019 564 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm7212-201ENSMUST00000120817 348 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
Col1a1P11087 Mir3097-201ENSMUST00000175356 67 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Mir5107-201ENSMUST00000175586 88 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm15257-201ENSMUST00000177680 883 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm15252-201ENSMUST00000177750 883 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm15256-201ENSMUST00000177793 883 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm15260-201ENSMUST00000179402 883 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm27960-201ENSMUST00000183445 184 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm37380-201ENSMUST00000193752 397 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm38840-201ENSMUST00000204716 843 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col1a1P11087 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Col1a1P11087 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.87□□□□□ -1.15
Col1a1P11087 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Col1a1P11087 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.87□□□□□ -1.15
Col1a1P11087 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms