Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 AC124601.1-201ENSMUST00000220531 135 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Mir365-2-201ENSMUST00000083555 112 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Mir106b-201ENSMUST00000083580 82 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm3563-201ENSMUST00000172963 1628 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Mir290a-201ENSMUST00000104627 83 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm14388-201ENSMUST00000118119 477 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm13196-201ENSMUST00000118297 379 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm25432-201ENSMUST00000158284 66 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Olfr331-202ENSMUST00000170501 957 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm43656-201ENSMUST00000197882 434 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm30708-201ENSMUST00000202183 312 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 AC154245.1-201ENSMUST00000224615 601 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 AC159476.1-201ENSMUST00000215914 1668 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.74□□□□□ -1.01
NpcdF8VQB8 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
NpcdF8VQB8 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
NpcdF8VQB8 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.73□□□□□ -1.01
NpcdF8VQB8 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm13771-201ENSMUST00000117988 238 ntBASIC8.73□□□□□ -1.01
NpcdF8VQB8 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm24685-201ENSMUST00000157764 285 ntBASIC8.73□□□□□ -1.01
NpcdF8VQB8 Gm26505-201ENSMUST00000176208 166 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms