Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lima1Q9ERG0 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.59□□□□□ -1.35
Lima1Q9ERG0 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Lima1Q9ERG0 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Lima1Q9ERG0 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm24286-201ENSMUST00000157632 128 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Mir5100-201ENSMUST00000174993 64 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm26179-201ENSMUST00000177723 132 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm17786-201ENSMUST00000182000 427 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm18430-201ENSMUST00000197534 682 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm44565-201ENSMUST00000208194 269 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm32899-201ENSMUST00000219694 207 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm10126-201ENSMUST00000221732 168 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm18618-201ENSMUST00000222211 473 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm5374-202ENSMUST00000222910 314 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lima1Q9ERG0 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm25546-201ENSMUST00000103977 132 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm26417-201ENSMUST00000104274 135 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm15105-201ENSMUST00000117777 204 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm14755-201ENSMUST00000118037 384 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm9439-201ENSMUST00000119554 973 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Mir1930-201ENSMUST00000158799 84 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm17212-201ENSMUST00000166666 259 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm27596-201ENSMUST00000185061 83 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms