Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm22438-201ENSMUST00000104049 132 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm26416-201ENSMUST00000104280 134 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm14869-201ENSMUST00000119007 884 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm12630-201ENSMUST00000121575 784 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm26183-201ENSMUST00000157685 139 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm23276-201ENSMUST00000157913 138 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm24057-201ENSMUST00000158616 302 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm5611-201ENSMUST00000164523 852 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm17022-201ENSMUST00000166415 922 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm4870-201ENSMUST00000198525 1251 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm2754-201ENSMUST00000223383 589 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Smc1aQ9CU62 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm26417-201ENSMUST00000104274 135 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm25505-201ENSMUST00000157220 246 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm16298-201ENSMUST00000161107 420 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm26729-201ENSMUST00000180744 352 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm8609-201ENSMUST00000182967 998 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm45497-201ENSMUST00000211701 740 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm10126-201ENSMUST00000221732 168 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Smc1aQ9CU62 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm13732-201ENSMUST00000117753 535 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm13183-201ENSMUST00000118615 789 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm14353-201ENSMUST00000122200 869 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm25178-201ENSMUST00000122633 325 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 297.4 ms