Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm43656-201ENSMUST00000197882 434 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm44075-201ENSMUST00000204208 216 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm45432-201ENSMUST00000210391 416 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm24032-201ENSMUST00000083932 159 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm6990-201ENSMUST00000086830 348 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm13940-201ENSMUST00000121023 301 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm12833-201ENSMUST00000136112 477 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm22990-201ENSMUST00000175427 89 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm24756-201ENSMUST00000177002 96 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.03□□□□□ -1.44
Scrt1Q99M85 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scrt1Q99M85 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Scrt1Q99M85 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.02□□□□□ -1.45
Scrt1Q99M85 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.02□□□□□ -1.45
Scrt1Q99M85 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms