Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm23734-201ENSMUST00000083753 109 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 AC122024.1-201ENSMUST00000219276 4850 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 AC124183.1-201ENSMUST00000222367 2135 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm26417-201ENSMUST00000104274 135 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm11370-201ENSMUST00000120583 260 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm16026-205ENSMUST00000162923 641 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm17022-201ENSMUST00000166415 922 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm24812-201ENSMUST00000175315 284 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm27360-201ENSMUST00000183487 80 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Ighv1-83-201ENSMUST00000199643 351 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm45739-201ENSMUST00000213094 388 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps53Q8CCB4 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm5702-201ENSMUST00000185629 2469 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm14727-201ENSMUST00000118526 525 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm12740-201ENSMUST00000118794 308 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm12849-201ENSMUST00000120013 739 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm11257-201ENSMUST00000121313 315 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm14721-201ENSMUST00000121381 525 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm10364-202ENSMUST00000153034 1001 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm26183-201ENSMUST00000157685 139 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm3760-201ENSMUST00000167475 804 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps53Q8CCB4 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Mir6244-201ENSMUST00000184156 117 ntBASIC8□□□□□ -1.13
Vps53Q8CCB4 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps53Q8CCB4 Gm42708-201ENSMUST00000196332 905 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms