Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm24473-201ENSMUST00000104483 131 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm13352-201ENSMUST00000117515 262 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm15078-201ENSMUST00000118371 782 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Mir7020-201ENSMUST00000183787 70 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm37328-201ENSMUST00000193191 640 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 AV026068-216ENSMUST00000223874 328 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 AV026068-218ENSMUST00000223980 575 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm12099-201ENSMUST00000118660 750 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm12307-201ENSMUST00000120581 590 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm15959-201ENSMUST00000121724 368 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm23030-201ENSMUST00000158004 273 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm24179-201ENSMUST00000158925 127 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Mir7220-201ENSMUST00000183978 60 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 A1cf-203ENSMUST00000224400 1204 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gm24695-201ENSMUST00000083877 83 ntBASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a6Q8C6K9 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm26289-201ENSMUST00000104169 131 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm26422-201ENSMUST00000104276 132 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm11848-201ENSMUST00000121207 973 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm25550-201ENSMUST00000158079 128 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm8582-201ENSMUST00000164061 789 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm25244-201ENSMUST00000178089 132 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm27601-201ENSMUST00000184794 127 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Mir6952-201ENSMUST00000185092 61 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm37609-201ENSMUST00000191778 678 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm19035-202ENSMUST00000194575 959 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm24621-201ENSMUST00000082679 140 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm10205-201ENSMUST00000087431 234 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Olfr687-201ENSMUST00000098154 938 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms