Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37395-201ENSMUST00000194721 697 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 AC120011.1-201ENSMUST00000202147 744 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm18127-201ENSMUST00000208479 725 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm32842-201ENSMUST00000212653 738 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 AC156803.1-201ENSMUST00000224407 820 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trim47Q8C0E3 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm24462-201ENSMUST00000102430 106 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm22080-201ENSMUST00000157591 106 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm22847-201ENSMUST00000157707 105 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm22687-201ENSMUST00000158301 105 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm22111-201ENSMUST00000178010 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm23687-201ENSMUST00000178664 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm24566-201ENSMUST00000179286 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm23305-201ENSMUST00000179342 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm26389-201ENSMUST00000179819 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm22130-201ENSMUST00000179979 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm22393-201ENSMUST00000180153 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm25085-201ENSMUST00000180298 79 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Mir7005-201ENSMUST00000185089 69 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm6610-201ENSMUST00000186324 358 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm29545-201ENSMUST00000188878 694 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm8891-201ENSMUST00000198546 832 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 AC211878.5-201ENSMUST00000221697 409 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm2544-201ENSMUST00000222702 756 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 AC116656.1-201ENSMUST00000227040 755 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim47Q8C0E3 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms