Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 CT009757.6-201ENSMUST00000220661 2312 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 AC154806.1-203ENSMUST00000227370 1032 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm38277-201ENSMUST00000195172 1367 ntBASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp40Q8BWR4 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm15000-201ENSMUST00000118275 1243 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm12447-201ENSMUST00000119110 470 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm2986-201ENSMUST00000121603 382 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm4152-201ENSMUST00000172675 259 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm43550-201ENSMUST00000200597 303 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm44162-201ENSMUST00000203543 544 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm45739-201ENSMUST00000213094 388 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 AC153557.1-201ENSMUST00000217697 403 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 AC156016.2-201ENSMUST00000228200 525 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 AC163660.4-201ENSMUST00000224983 2171 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm19210-201ENSMUST00000199562 1350 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 CT025642.2-201ENSMUST00000225009 1649 ntBASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp40Q8BWR4 Gm44704-201ENSMUST00000208963 1990 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm6493-201ENSMUST00000159889 1786 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm37786-201ENSMUST00000191714 3225 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Mir466f-2-201ENSMUST00000104805 94 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm11462-201ENSMUST00000117749 562 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm15712-201ENSMUST00000120369 1156 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Mir6348-201ENSMUST00000183804 120 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm27152-201ENSMUST00000183828 99 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm37177-201ENSMUST00000193768 417 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 AC117797.1-201ENSMUST00000223977 695 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms