Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm17076-201ENSMUST00000165185 1401 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm18066-201ENSMUST00000210904 1774 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm15275-201ENSMUST00000154752 347 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm27185-201ENSMUST00000184296 247 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm27588-201ENSMUST00000185096 263 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm28614-201ENSMUST00000186483 458 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm9127-201ENSMUST00000188041 985 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm28655-201ENSMUST00000191538 692 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm19201-201ENSMUST00000210127 778 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm45693-201ENSMUST00000211391 1157 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 AC163296.1-201ENSMUST00000220004 1266 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 AC125543.2-201ENSMUST00000222114 105 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 CT030170.7-201ENSMUST00000223372 103 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gm43537-201ENSMUST00000199064 3110 ntBASIC9.84□□□□□ -0.83
Clcn1Q64347 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clcn1Q64347 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Clcn1Q64347 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm20236-201ENSMUST00000193037 4540 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm37094-201ENSMUST00000193352 4540 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 AC120347.1-201ENSMUST00000223326 1639 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm6654-201ENSMUST00000118950 348 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm15665-201ENSMUST00000119116 847 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm11866-201ENSMUST00000120209 335 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm16523-201ENSMUST00000121253 592 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm22408-201ENSMUST00000174925 65 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm27034-201ENSMUST00000182552 940 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm27236-201ENSMUST00000184147 442 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Mir6409-201ENSMUST00000184957 92 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC9.83□□□□□ -0.84
Clcn1Q64347 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm44705-201ENSMUST00000206719 339 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 AC116726.2-201ENSMUST00000217629 986 ntBASIC9.83□□□□□ -0.84
Clcn1Q64347 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Clcn1Q64347 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clcn1Q64347 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms