Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Snora21-201ENSMUST00000082967 137 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Gm24451-201ENSMUST00000083353 133 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
ClpbQ60649 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.6□□□□□ -1.35
ClpbQ60649 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ClpbQ60649 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.59□□□□□ -1.35
ClpbQ60649 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ClpbQ60649 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ClpbQ60649 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm22774-201ENSMUST00000102084 109 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm11903-201ENSMUST00000118958 727 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm27014-201ENSMUST00000182658 937 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Gm29161-201ENSMUST00000188250 699 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Gm43243-201ENSMUST00000199964 278 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm4585-201ENSMUST00000207218 452 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm8168-201ENSMUST00000209631 948 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Gm19073-201ENSMUST00000219978 555 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Gm46231-201ENSMUST00000220152 314 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ClpbQ60649 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ClpbQ60649 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ClpbQ60649 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ClpbQ60649 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.59□□□□□ -1.35
ClpbQ60649 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ClpbQ60649 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
ClpbQ60649 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
ClpbQ60649 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.59□□□□□ -1.36
ClpbQ60649 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
ClpbQ60649 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.59□□□□□ -1.36
ClpbQ60649 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
ClpbQ60649 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Mir697-201ENSMUST00000102316 109 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm649-201ENSMUST00000117284 1054 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm15007-201ENSMUST00000119982 710 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm12181-201ENSMUST00000121448 531 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm16284-201ENSMUST00000140995 400 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm25969-201ENSMUST00000157166 132 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm26321-201ENSMUST00000157740 242 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm20637-201ENSMUST00000175715 462 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
ClpbQ60649 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms