Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm25353-201ENSMUST00000179366 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm22992-201ENSMUST00000179496 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm25892-201ENSMUST00000179867 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm24092-201ENSMUST00000180257 121 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm7745-201ENSMUST00000182235 973 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Mir7006-201ENSMUST00000183624 69 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm37375-201ENSMUST00000193859 387 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm37385-201ENSMUST00000195223 387 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm43160-201ENSMUST00000196453 421 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm36448-201ENSMUST00000199916 438 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Gm43798-201ENSMUST00000202056 394 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Mir298-201ENSMUST00000083476 82 ntBASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Shank3Q4ACU6 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm43684-201ENSMUST00000199279 6573 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm7146-201ENSMUST00000116079 739 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm15073-201ENSMUST00000117432 634 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm13265-201ENSMUST00000118090 421 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm15078-201ENSMUST00000118371 782 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm29519-201ENSMUST00000186994 398 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm18117-201ENSMUST00000187720 742 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.31□□□□□ -1.08
Shank3Q4ACU6 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Shank3Q4ACU6 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm14300-201ENSMUST00000120800 946 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm2959-201ENSMUST00000169844 621 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm18405-201ENSMUST00000220743 511 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm37100-201ENSMUST00000193344 1353 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.3□□□□□ -1.08
Shank3Q4ACU6 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms