Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm11433-201ENSMUST00000118318 228 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm13900-201ENSMUST00000119402 498 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm5406-201ENSMUST00000120054 766 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm16588-201ENSMUST00000162889 355 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm3123-201ENSMUST00000163480 480 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Mir7084-201ENSMUST00000183876 70 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm28688-201ENSMUST00000187301 268 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm8282-201ENSMUST00000187559 483 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm29156-201ENSMUST00000187764 499 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm43689-201ENSMUST00000195951 427 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm42584-201ENSMUST00000201404 220 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm9038-201ENSMUST00000203400 604 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm44971-201ENSMUST00000206192 337 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm9240-201ENSMUST00000206527 742 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm18907-201ENSMUST00000209719 932 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.36□□□□□ -1.39
Col8a1Q00780 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 AC113031.2-201ENSMUST00000226132 579 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 AC167013.3-201ENSMUST00000228110 989 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col8a1Q00780 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm22504-201ENSMUST00000082963 139 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col8a1Q00780 Gm42905-201ENSMUST00000196237 1611 ntBASIC6.36□□□□□ -1.39
Col8a1Q00780 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col8a1Q00780 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm14358-201ENSMUST00000118458 403 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm13252-201ENSMUST00000119355 321 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms