Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm42898-201ENSMUST00000200370 3073 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm12439-201ENSMUST00000117162 365 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm13357-201ENSMUST00000120528 537 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm16016-201ENSMUST00000120831 550 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm24781-201ENSMUST00000157636 117 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm22428-201ENSMUST00000158554 132 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm23164-201ENSMUST00000175084 111 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm25574-201ENSMUST00000175245 249 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Mir7669-201ENSMUST00000183442 58 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm21301-201ENSMUST00000189476 699 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm19024-201ENSMUST00000194681 1319 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Gm38697-201ENSMUST00000198061 1746 ntBASIC5.94□□□□□ -1.46
Nkx3-1P97436 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Nkx3-1P97436 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm45250-201ENSMUST00000209414 3592 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Mir674-201ENSMUST00000102421 100 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Mir760-201ENSMUST00000103257 119 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm12842-201ENSMUST00000117298 476 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm23810-201ENSMUST00000175150 74 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm44538-201ENSMUST00000205615 348 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Gm22684-201ENSMUST00000082849 132 ntBASIC5.93□□□□□ -1.46
Nkx3-1P97436 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nkx3-1P97436 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC5.93□□□□□ -1.46
Nkx3-1P97436 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms